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Field: Study of the intracellular trafficking pathway of lysosomal membrane proteins using flourescent microscopic imaging techniques. Research Interest:
My
current research involves the study of structural and functional aspects
of the intestinal fatty acid binding protein (IFABP). This is a b-barrel
protein that contains a short helix-turn-helix domain near the N-terminus,
which participates in the regulation of uptake and delivery of fatty
acids. NMR evidence points to an order-disorder equilibrium state
at this region (Biochemistry (1997) 36, 2278). Being the 'order' conformation
favored when the fatty acid is bound. To study this, we chose temperature
as a physical variable to increase protein flexibility. We use aromatic
residues as well as the extrinsic fluorescent probes 1,8-anilino naphthalene
sulfonate and its dimer bisANS, as spectroscopic probes to monitor
IFABP conformation as a function of temperature, in the absence or
in the presence of its natural ligand oleic acid. In addition, given
that limited proteolysis may provide information on structural changes
ocurring upon binding of ligands, we also use this approach. In this
way, we have detected a conformational transition, between 35 and
50°C, occurring well below the denaturation temperature of IFABP that
does not involve the b-barrel structure. This transition is prevented
by the binding of the fatty acid ligand. The natural ligand protects
the protein from digestion supporting our previous results. An enhanced
flexibility occurring at the helical domain was put forward to interpret
this data, in agreement with the conformational equilibrium postulated.
Currently we are conducting fluorescence and circular dichroism experiments
involving the interaction of ANS and bisANS with IFABP, given that
we have found a differential behavior of this probes bound to the
protein in the same temperature range where the transition occurs. |
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